cc.mallet.grmm.test
Class TestInference

java.lang.Object
  junit.framework.Assert
      junit.framework.TestCase
          cc.mallet.grmm.test.TestInference

All Implemented Interfaces:

junit.framework.Test

public class TestInference
extends junit.framework.TestCase

Torture tests of inference in GRMM. Well, actually, they're not all that torturous, but hopefully they're at least somewhat disconcerting.

Version:

$Id: TestInference.java,v 1.1 2007/10/22 21:37:40 mccallum Exp $

Author:

Charles Sutton

Field Summary

java.lang.Class[]	algorithms
java.lang.Class[]	allAlgs
java.lang.Class[]	appxAlgs
java.lang.Class[]	treeAlgs

Constructor Summary

TestInference(java.lang.String name)

Method Summary

static UndirectedModel	createRandomGrid(int w, int h, int maxOutcomes, java.util.Random r)
static java.util.List	createTestModels()
void	ignoreTestNumMessages()
static void	main(java.lang.String[] args)
void	runJunctionTree()
protected void	setUp()
static junit.framework.Test	suite()
void	testBeliefPropagation()
void	testBpJoint()
void	testBpLargeModels()
void	testDefaultLookupMarginal()
void	testDestructiveAssignment()
void	testDirectedJt()
void	testDisconnectedModel()
void	testFactorizedJoint()
void	testFindVariable()
void	testInfiniteCost()
void	testJointConsistent()
void	testJtCaching()
void	testJtConsistency()
void	testJtConstant()
void	testJtViterbi()
void	testJunctionTreeConnectedFromRoot()
void	testLogMarginalize()
void	testLogNormalize()
void	testLoopyCaching()
void	testLoopyConvergence()
void	testMarginals()
void	testMaxMarginals()
void	testMultiply()
void	testQuery()
void	testSerializable()
void	testSingletonGraph()
void	testSumLogProb()
void	testTreeViterbi()
void	testTrp()
void	testTrpJoint()
void	testTrpLargeModels()
void	testTrpNonDestructivity() Tests that running TRP doesn't inadvertantly change potentials in the original graph.
void	testTrpOnTrees()
void	testTrpReuse()
void	testTrpTreeList()
void	testTrpViterbiEquiv()
void	testTrpViterbiEquiv2()
void	testUndirectedIndices()
void	testUniformJoint()
void	timeMarginalization()

Methods inherited from class junit.framework.TestCase

countTestCases, createResult, getName, run, run, runBare, runTest, setName, tearDown, toString

Methods inherited from class junit.framework.Assert

assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertFalse, assertFalse, assertNotNull, assertNotNull, assertNotSame, assertNotSame, assertNull, assertNull, assertSame, assertSame, assertTrue, assertTrue, fail, fail, failNotEquals, failNotSame, failSame, format

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

algorithms

public final java.lang.Class[] algorithms

appxAlgs

public final java.lang.Class[] appxAlgs

allAlgs

public final java.lang.Class[] allAlgs

treeAlgs

public final java.lang.Class[] treeAlgs

Constructor Detail

TestInference

public TestInference(java.lang.String name)

Method Detail

createRandomGrid

public static UndirectedModel createRandomGrid(int w,
                                               int h,
                                               int maxOutcomes,
                                               java.util.Random r)

createTestModels

public static java.util.List createTestModels()

testUniformJoint

public void testUniformJoint()
                      throws java.lang.Exception

Throws:

java.lang.Exception

testJointConsistent

public void testJointConsistent()
                         throws java.lang.Exception

Throws:

java.lang.Exception

testFactorizedJoint

public void testFactorizedJoint()
                         throws java.lang.Exception

Throws:

java.lang.Exception

testMarginals

public void testMarginals()
                   throws java.lang.Exception

Throws:

java.lang.Exception

testQuery

public void testQuery()
               throws java.lang.Exception

Throws:

java.lang.Exception

testSerializable

public void testSerializable()
                      throws java.lang.Exception

Throws:

java.lang.Exception

ignoreTestNumMessages

public void ignoreTestNumMessages()

testJtConsistency

public void testJtConsistency()

testTrp

public void testTrp()

testTrpJoint

public void testTrpJoint()

testTrpNonDestructivity

public void testTrpNonDestructivity()

Tests that running TRP doesn't inadvertantly change potentials in the original graph.

testTrpReuse

public void testTrpReuse()

testTrpTreeList

public void testTrpTreeList()

testUndirectedIndices

public void testUndirectedIndices()

testTrpViterbiEquiv

public void testTrpViterbiEquiv()

testTrpOnTrees

public void testTrpOnTrees()

testTrpViterbiEquiv2

public void testTrpViterbiEquiv2()

testTreeViterbi

public void testTreeViterbi()

testJtViterbi

public void testJtViterbi()

testMaxMarginals

public void testMaxMarginals()
                      throws java.lang.Exception

Throws:

java.lang.Exception

testBeliefPropagation

public void testBeliefPropagation()

testBpJoint

public void testBpJoint()

testDirectedJt

public void testDirectedJt()

setUp

protected void setUp()

Overrides:

setUp in class junit.framework.TestCase

testMultiply

public void testMultiply()

testLogMarginalize

public void testLogMarginalize()

testLogNormalize

public void testLogNormalize()

testSumLogProb

public void testSumLogProb()

testInfiniteCost

public void testInfiniteCost()

testJtCaching

public void testJtCaching()

testFindVariable

public void testFindVariable()

testDefaultLookupMarginal

public void testDefaultLookupMarginal()

testDisconnectedModel

public void testDisconnectedModel()

timeMarginalization

public void timeMarginalization()

runJunctionTree

public void runJunctionTree()

testDestructiveAssignment

public void testDestructiveAssignment()

testLoopyConvergence

public void testLoopyConvergence()

testSingletonGraph

public void testSingletonGraph()

testLoopyCaching

public void testLoopyCaching()

testJunctionTreeConnectedFromRoot

public void testJunctionTreeConnectedFromRoot()

testBpLargeModels

public void testBpLargeModels()

testTrpLargeModels

public void testTrpLargeModels()

testJtConstant

public void testJtConstant()
                    throws java.io.IOException

Throws:

java.io.IOException

suite

public static junit.framework.Test suite()

main

public static void main(java.lang.String[] args)
                 throws java.lang.Exception

Throws:

java.lang.Exception